Metabolic profiling of potential lung cancer biomarkers using bronchoalveolar lavage fluid and the integrated direct infusion/ gas chromatography mass spectrometry platform

dc.contributor.authorCallejón Leblic, María Belén
dc.contributor.authorGarcía Barrera, Tamara
dc.contributor.authorGrávalos Guzman, Jesús
dc.contributor.authorPereira Vega, Antonio
dc.contributor.authorGómez Ariza, José Luis
dc.date.accessioned2016-11-15T13:14:02Z
dc.date.available2016-11-15T13:14:02Z
dc.date.issued2016
dc.description.abstractLung cancer is one of the ten most common causes of death worldwide, so that the search for early diagnosis biomarkers is a very challenging task. Bronchoalveolar lavage fluid (BALF) provides information on cellular and biochemical epithelial surface of the lower respiratory tract constituents and no previous metabolomic studies have been performed with BALF samples from patients with lung cancer. Therefore, this fluid has been explored looking for new contributions in lung cancer metabolism. In this way, two complementary metabolomics techniques based on direct infusion high resolution mass spectrometry (DI-ESI-QTOF-MS) and gas chromatography mass spectrometry (GC–MS) have been applied to compare statistically differences between lung cancer (LC) and control (C) BALF samples, using partial least square discriminant analysis (PLS-DA) in order to find and identify potential biomarkers of the disease. A total of 42 altered metabolites were found in BALF from LC. The metabolic pathway analysis showed that glutamate and glutamine metabolism pathway was mainly altered by this disease. In addition, we assessed the biomarker specificity and sensitivity according to the area under the receiver operator characteristic (ROC) curves, indicating that glycerol and phosphoric acid were potential sensitive and specific biomarkers for lung cancer diagnosis and prognosis. Biological significance The search for early diagnosis of lung cancer is a very challenging task because of the high mortality associated to this disease and its critical linkage to the initiation of treatment. Bronchoalveolar lavage fluid provides information on cellular and biochemical epithelial surface of the lower respiratory tract constituents and no previous metabolomic studies have been performed with BALF samples from patients with lung cancer. Since BALF is in close interaction with lung tissue it is a more representative sample of lung status than other peripheral biofluids as blood or urine studied in previous works. Therefore, this study represents an innovative contribution in this topic that complement previous investigations about lung cancer, opening up new possibilities for understanding the pathogenesis of this disease and the use of efficient biomarkers. Therefore, this fluid has been explored looking for new contributions in lung cancer metabolism. In this way, two complementary metabolomic techniques based on direct infusion high resolution mass spectrometry (DI-ESI-QTOF-MS) and gas chromatography mass spectrometry (GC–MS) have been applied to compare statistically significant differences between lung cancer (LC) and control (C) BALF samples, using partial least square discriminant analysis (PLS-DA) in order to find and identify potential biomarkers of the disease. A total of 42 altered metabolites were found in BALF from LC. The metabolic pathway analysis showed that glutamate and glutamine metabolism pathway was mainly altered by this disease. In addition, we assessed the biomarker specificity and sensitivity according to the area under the receiver operator characteristic (ROC) curves, indicating that glycerol and phosphoric acid were potential sensitive and specific biomarkers for lung cancer diagnosis and prognosis.en_US
dc.description.departmentQuímica "Profesor José Carlos Vílchez Martín"
dc.identifier.citationCallejón Leblic, M.B., García Barrera, T., Grávalos Guzman, J., Pereira Vega, A., Gómez Ariza, J.L.: "Metabolic profiling of potential lung cancer biomarkers using bronchoalveolar lavage fluid and the integrated direct infusion/ gas chromatography mass spectrometry platform". Journal of Proteomics. Vol. 145, págs. 197–206, (2016). DOI: 10.1016/j.jprot.2016.05.030en_US
dc.identifier.doi10.1016/j.jprot.2016.05.030
dc.identifier.issn1874-3919
dc.identifier.issn1876-7737 (electrónico)
dc.identifier.urihttp://hdl.handle.net/10272/12838
dc.language.isoengen_US
dc.publisherElsevieren_US
dc.relation.publisherversionhttp://dx.doi.org/10.1016/j.jprot.2016.05.030en_US
dc.rightsAtribución-NoComercial-SinDerivadas 3.0 España*
dc.rights.accessRightsopen accessen_US
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/es/*
dc.subject.otherLung canceren_US
dc.subject.otherMetabolomicsen_US
dc.subject.otherBronchoalveolar fluiden_US
dc.subject.otherBiomarkersen_US
dc.subject.otherDirect infusion mass spectrometryen_US
dc.subject.otherGas chromatography mass spectrometryen_US
dc.titleMetabolic profiling of potential lung cancer biomarkers using bronchoalveolar lavage fluid and the integrated direct infusion/ gas chromatography mass spectrometry platformen_US
dc.typejournal articleen_US
dspace.entity.typePublication
relation.isAuthorOfPublication0b5daa17-1b57-47a3-8c69-74e954256f24
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relation.isAuthorOfPublication82b7e28c-8a71-4d42-8b6d-fc4d3545a95b
relation.isAuthorOfPublication.latestForDiscovery0b5daa17-1b57-47a3-8c69-74e954256f24

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